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  1. Research & Faculty
  2. Department Publications

Department Publications

Submitted

Submitted.

In Press

Kong, N. ; Fu, L. ; Peng, Q. ; Li, H. Metal Chelation Dynamically Regulates The Mechanical Properties Of Engineered Protein Hydrogels. ACS Biomaterials Science & Engineering In Press.
Mustoe, C. L. ; Yu, D. ; Gunabalasingam, M. ; Patrick, B. O. ; Kennepohl, P. Probing Covalency In Halogen Bonds Through Donor K-Edge X-Ray Absorption Spectroscopy: Polyhalides As Coordination Complexes. Faraday Discussions In Press.

2018

Leung, K. K. ; Gaxiola, A. Diaz; Yu, H. Zhong; Bizzotto, D. Tailoring The Dna Sam Surface Density On Different Surface Crystallographic Features Using Potential Assisted Thiol Exchange. Electrochimica Acta 2018, 261, 188–197.
Chile, L. - E. ; Kaser, S. J. ; Hatzikiriakos, S. G. ; Mehrkhodavandi, P. Synthesis And Thermorheological Analysis Of Biobased Lignin-Graft-Poly(Lactide) Copolymers And Their Blends. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2018, 6, 1650-1661.
Wang, J. ; Zhou, Y. ; Wang, M. ; Bi, W. ; Li, H. ; Chen, D. Da Yong High-Throughput Analysis For Artemisinins With Deep Eutectic Solvents Mechanochemical Extraction And Direct Analysis In Real Time Mass Spectrometry. Analytical Chemistry 2018, null.
Hedges, J. B. ; Kuatsjah, E. ; Du, Y. - L. ; Eltis, L. D. ; Ryan, K. S. Snapshots Of The Catalytic Cycle Of An O2, Pyridoxal Phosphate-Dependent Hydroxylase. ACS Chemical Biology 2018, In Press.
Dehn, M. H. ; Arseneau, D. J. ; Buck, T. ; Cortie, D. L. ; Fleming, D. G. ; King, S. R. ; MacFarlane, W. A. ; McDonagh, A. M. ; McFadden, R. M. L. ; Mitchell, D. R. G. ; , Nature Of Magnetism In Thiol-Capped Gold Nanoparticles Investigated With Muon Spin Rotation. Applied Physics Letters 2018, 112, 053105.
Ma, H. ; Zhang, K. ; Jiang, Q. ; Dai, D. ; Li, H. ; Bi, W. ; Chen, D. Da Yong Characterization Of Plant Polysaccharides From Dendrobium Officinale By Multiple Chromatographic And Mass Spectrometric Techniques. Journal of Chromatography A 2018, 1547, 29 - 36.
Cheng, J. ; Chen, D. D. Y. Nonaqueous Capillary Electrophoresis Mass Spectrometry Method For Determining Highly Hydrophobic Peptides. Electrophoresis 2018.
MacLennan, M. S. ; Peru, K. M. ; Swyngedouw, C. ; Fleming, I. ; Chen, D. D. Y. ; Headley, J. V. Characterization Of Athabasca Lean Oil Sands And Mixed Surficial Materials: Comparison Of Capillary Electrophoresis-Low Resolution Mass Spectrometry And High-Resolution Mass Spectrometry. Rapid Communications in Mass Spectrometry 2018.
Warth, B. ; Raffeiner, P. ; Granados, A. ; Huan, T. ; Fang, M. ; Forsberg, E. M. ; H Benton, P. ; Goetz, L. ; Johnson, C. H. ; Siuzdak, G. Metabolomics Reveals That Dietary Xenoestrogens Alter Cellular Metabolism Induced By Palbociclib/letrozole Combination Cancer Therapy. Cell chemical biology 2018.
Zhang, K. ; Ma, H. ; Yan, P. ; Tong, W. ; Huang, X. ; Chen, D. D. Y. Electrochemical Detection Of Microcystin-Lr Based On Its Deleterious Effect On Dna. Talanta 2018, 185, 405-410.
Guijas, C. ; J Montenegro-Burke, R. ; Domingo-Almenara, X. ; Palermo, A. ; Warth, B. ; Hermann, G. ; Koellensperger, G. ; Huan, T. ; Uritboonthai, W. ; Aisporna, A. E. ; , Metlin: A Technology Platform For Identifying Knowns And Unknowns. Analytical chemistry 2018.
Liu, P. F. ; Li, Y. J. ; Wang, Y. ; Bateman, A. P. ; Zhang, Y. ; Gong, Z. H. ; Bertram, A. K. ; Martin, S. T. Viscous States Affect The Browning Of Atmospheric Organic Particulate Matter. ACS CENTRAL SCIENCE 2018, 4, 207-215.
Kovalchik, K. A. ; Moggridge, S. ; Chen, D. D. Y. ; Morin, G. B. ; Hughes, C. S. Parsing And Quantification Of Raw Orbitrap Mass Spectrometer Data Using Rawquant. Journal of Proteome Research 2018, null.
Ma, H. ; Jiang, Q. ; Dai, D. ; Li, H. ; Bi, W. ; Chen, D. Da Yong Direct Analysis In Real Time Mass Spectrometry For Characterization Of Large Saccharides. Analytical Chemistry 2018, null.
Wong-DeRieux, W. - S. ; Li, Y. ; Lin, P. ; Laskin, J. ; Laskin, A. ; Bertram, A. K. ; Nizkorodov, S. A. ; Shiraiwa, M. Predicting The Glass Transition Temperature And Viscosity Of Secondary Organic Material Using Molecular Composition. ATMOSPHERIC CHEMISTRY AND PHYSICS 2018, 18, 6331-6351.
Koga, Y. The Second And Higher Order Derivative Thermodynamic Quantities And Fluctuation Functions. Journal of Molecular Liquids 2018, 249, 1009–1011.
Zaveri, R. A. ; Shilling, J. E. ; Zelenyuk, A. ; Liu, J. ; Bell, D. M. ; D'Ambro, E. L. ; Gaston, C. J. ; J.A., T. ; Laskin, A. ; Ling, P. ; Wilson, J. ; Easter, R. C. ; Wang, J. ; Bertram, A. K. ; Martin, S. T. ; Seinfeld, J. H. ; Worsnop, D. R. Growth Kinetics And Size Distribution Dynamics Of Viscous Secondary Organic Aerosol. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018, 52, 1191-1199.
Yonenaga, K. ; Morita, T. ; Nishikawa, K. ; Koga, Y. Effects Of Ionic Liquid Constituent Cations, Tetraalkylammoniums, On Water Studied By Means Of The “1-Propanol Probing Methodology”. Journal of Molecular Liquids 2018, 252, 58-61.
Reid, J. P. ; Bertram, A. K. ; Topping, D. O. ; Laskin, A. ; Martin, S. T. ; Petters, M. D. ; Pope, F. D. ; Rovelli, G. The Viscosity Of Atmospherically Relevant Organic Particles. NATURE COMMUNICATIONS 2018, 9.
MacLennan, M. S. ; Kok, M. G. M. ; Soliman, L. ; So, A. ; Hurtado-Coll, A. ; Chen, D. D. Y. Capillary Electrophoresis-Mass Spectrometry For Targeted And Untargeted Analysis Of The Sub-5 Kda Urine Metabolome Of Patients With Prostate Or Bladder Cancer: A Feasibility Study. Journal of Chromatography B 2018, 1074–1075, 79 - 85.
Forsberg, E. M. ; Huan, T. ; Rinehart, D. ; H Benton, P. ; Warth, B. ; Hilmers, B. ; Siuzdak, G. ; Wolan, D. W. ; Spiker, M. E. ; Benton, H. P. ; Siuzdak, G. Data Processing, Multi-Omic Pathway Mapping, And Metabolite Activity Analysis Using Xcms Online. Nature protocols 2018, 13, 633-651.
Macdonald, S. S. ; Patel, A. ; Larmour, V. L. C. ; Morgan-Lang, C. ; Hallam, S. J. ; Mark, B. L. ; Withers, S. G. Structural And Mechanistic Analysis Of A Beta-Glycoside Phosphorylase Identified By Screening A Metagenomic Library. Journal of Biological Chemistry 2018, 293, 3451-3467.
Dehn, M. H. ; Fleming, D. G. ; W MacFarlane, A. ; MacLachlan, M. J. ; Zamarion, V. M. ; Kiefl, R. F. Dynamics Of Anisotropic Muonium On Silica Surfaces Explained By Monte Carlo Simulation Of The Muon Depolarization. In Proceedings of the 14th International Conference on Muon Spin Rotation, Relaxation and Resonance ($μ$SR2017); Proceedings of the 14th International Conference on Muon Spin Rotation, Relaxation and Resonance ($μ$SR2017); 2018.
Saxena, H. ; Hsu, B. ; de Asis, M. ; Zierke, M. ; Sim, L. ; Withers, S. G. ; Wakarchuk, W. Characterization Of A Thermostable Endoglucanase From Cellulomonas Fimi Atcc484. Biochemistry and Cell Biology 2018, 96, 68–76.
Kreitzman, S. R. ; Cottrell, S. P. ; Fleming, D. G. ; Sun-Mack, S. Understanding The Double Quantum Muonium Rf Resonance. In Proceedings of the 14th International Conference on Muon Spin Rotation, Relaxation and Resonance ($μ$SR2017); Proceedings of the 14th International Conference on Muon Spin Rotation, Relaxation and Resonance ($μ$SR2017); 2018.
Weber, P. ; Nasseri, S. A. ; Pabst, B. M. ; Torvisco, A. ; Müller, P. ; Paschke, E. ; Tschernutter, M. ; Windischhofer, W. ; Withers, S. G. ; Wrodnigg, T. M. ; , Potent Gh20 N-Acetyl-$\beta$-D-Hexosaminidase Inhibitors: N-Substituted 3-Acetamido-4-Amino-5-Hydroxymethyl-Cyclopentanediols. Molecules 2018, 23, 708.
Zhao, X. ; Shen, Y. ; Tong, W. ; Wang, G. ; Chen, D. Da Yong Deducing Disulfide Patterns Of Cysteine-Rich Proteins Using Signature Fragments Produced By Top-Down Mass Spectrometry. Analyst 2018, 143, 817-823.
Hettle, A. G. ; Vickers, C. ; Robb, C. S. ; Liu, F. ; Withers, S. G. ; Hehemann, J. - H. ; Boraston, A. B. The Molecular Basis Of Polysaccharide Sulfatase Activity And A Nomenclature For Catalytic Subsites In This Class Of Enzyme. Structure 2018.
Bizzotto, D. In Situ Spectroelectrochemical Fluorescence Microscopy For Studying Electrodes Modified By Molecular Adsorbates. Current Opinion in Electrochemistry 2018, 7, 161–171.
Smirnova, I. ; Kasho, V. ; Jiang, X. ; Chen, H. - M. ; Withers, S. G. ; H Kaback, R. Oversized Galactosides As A Probe For Conformational Dynamics In Lacy. Proceedings of the National Academy of Sciences 2018, 115, 4146–4151.
Bizzotto, D. ; Burgess, I. J. ; Doneux, T. ; Sagara, T. ; Yu, H. Zhong Beyond Simple Cartoons: Challenges In Characterizing Electrochemical Biosensor Interfaces. ACS Sensors 2018, acssensors.7b00840.

2017

Cheng, J. ; Wang, L. ; Liu, W. ; Chen, D. D. Y. Quantitative Nonaqueous Capillary Electrophoresis–Mass Spectrometry Method For Determining Active Ingredients In Plant Extracts. Analytical Chemistry 2017, 89, 1411-1415.
Lebl, R. ; Thonhofer, M. ; Tysoe, C. ; Pabst, B. M. ; Schalli, M. ; Weber, P. ; Paschke, E. ; Stütz, A. E. ; Tschernutter, M. ; Windischhofer, W. ; Withers, S. G. A Morita-Baylis-Hillman Based Route To C-5A-Chain-Extended 4-Epi-Isofagomine Type Glycosidase Inhibitors. Carbohydrate Research 2017, 442, 31–40.
Lizundia, E. ; Nguyen, T. - D. ; Vilas, J. L. ; Hamad, W. Y. ; MacLachlan, M. J. Chiroptical, Morphological And Conducting Properties Of Chiral Nematic Mesoporous Cellulose/polypyrrole Composite Films. Journal of Materials Chemistry A 2017, 5, 19184–19194.
Zhang, C. ; Zhang, X. ; Daly, K. ; Berlinguette, C. P. ; Trudel, S. Water Oxidation Catalysis: Tuning The Electrocatalytic Properties Of Amorphous Lanthanum Cobaltite Through Calcium Doping. ACS Catalysis 2017, 7, 6385–6391.
J Montenegro-Burke, R. ; Aisporna, A. E. ; H Benton, P. ; Rinehart, D. ; Fang, M. ; Huan, T. ; Warth, B. ; Forsberg, E. ; Abe, B. T. ; Ivanisevic, J. ; Wolan, D. W. ; Teyton, L. ; Lairson, L. ; Siuzdak, G. Data Streaming For Metabolomics: Accelerating Data Processing And Analysis From Days To Minutes. Analytical chemistry 2017, 89, 1254–1259.
Li, D. ; Zhu, J. ; Wang, M. ; Bi, W. ; Huang, X. ; Chen, D. Da Yong Extraction Of Trace Polychlorinated Biphenyls In Environmental Waters By Well-Dispersed Velvet-Like Magnetic Carbon Nitride Nanocomposites. Journal of Chromatography A 2017, 1491, 27 - 35.
Strazzulli, A. ; Cobucci-Ponzano, B. ; Carillo, S. ; Bedini, E. ; Corsaro, M. Michela; Pocsfalvi, G. ; Withers, S. G. ; Rossi, M. ; Moracci, M. Introducing Transgalactosylation Activity Into A Family 42 $\upbeta$-Galactosidase. Glycobiology 2017, 27, 425–437.
Shree, M. V. ; Fabulyak, D. ; Baillie, R. A. ; Lefèvre, G. P. ; Dettelbach, K. ; Béthegnies, A. ; Patrick, B. O. ; Legzdins, P. ; Rosenfeld, D. C. Multiple C–H Activations Of Linear Alkanes By Various (N5-Cyclopentadienyl)W(No)(Ch2Cme3)2 Complexes. Organometallics 2017, 36, 2714-2726.
Weekes, D. M. ; M. Jaraquemada-Pelaez, deG. ; Kostelnik, T. I. ; Patrick, B. O. ; Orvig, C. Di- And Trivalent Metal-Ion Solution Studies With The Phosphinate-Containing Heterocycle Deda-(Po). Inorg. Chem. 2017, 56, 10155-10161.
S Mehr, H. M. ; Oshima, H. ; Carta, V. ; Patrick, B. O. ; White, N. G. ; MacLachlan, M. J. Tuning The Tautomeric Behavior Of Tris (Salicylaldimines). Organic & Biomolecular Chemistry 2017.
Li, T. ; Cao, Y. ; He, J. ; Berlinguette, C. P. Electrolytic Co2 Reduction In Tandem With Oxidative Organic Chemistry. ACS central science 2017, 3, 778–783.
Xu, M. ; Yue, G. ; Bizzotto, D. ; Asselin, E. Electrodeposition Of Aluminum Onto Copper-Coated Printed Circuit Boards. Journal of the Electrochemical Society 2017, 164, D729–D736.
Huan, T. ; Forsberg, E. M. ; Rinehart, D. ; Johnson, C. H. ; Ivanisevic, J. ; H Benton, P. ; Fang, M. ; Aisporna, A. ; Hilmers, B. ; Poole, F. L. ; Thorgersen, M. P. ; Adams, M. W. ; Krantz, G. ; Fields, M. W. ; Robbins, P. D. ; Niedernhofer, L. J. ; Ideker, T. ; Majumder, E. L. ; Wall, J. D. ; Rattray, N. J. ; Goodacre, R. ; Lairson, L. L. ; Siuzdak, G. Systems Biology Guided By Xcms Online Metabolomics. Nature methods 2017, 14, 461.
Fan, S. ; Zhu, J. ; Ren, L. ; Wang, M. ; Bi, W. ; Li, H. ; Huang, X. ; Chen, D. Da Yong Co-Solvent Enhanced Adsorption With Magnetic Velvet-Like Carbon Nitride For High Efficiency Solid Phase Extraction. Analytica Chimica Acta 2017, 960, 63 - 71.
Kuatsjah, E. ; Chen, H. - M. ; Withers, S. G. ; Eltis, L. D. Characterization Of An Extradiol Dioxygenase Involved In The Catabolism Of Lignin-Derived Biphenyl. FEBS} Letters 2017, 591, 1001–1009.
Kovalchik, K. A. ; MacLennan, M. S. ; Peru, K. M. ; Headley, J. V. ; Chen, D. D. Y. Standard Method Design Considerations For Semi-Quantification Of Total Naphthenic Acids In Oil Sands Process Affected Water By Mass Spectrometry: A Review. Frontiers of Chemical Science and Engineering 2017, 11, 497-507.