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Department Publications

Submitted

Submitted.

In Press

Kong, N. ; Fu, L. ; Peng, Q. ; Li, H. Metal Chelation Dynamically Regulates The Mechanical Properties Of Engineered Protein Hydrogels. ACS Biomaterials Science & Engineering In Press.
Mustoe, C. L. ; Yu, D. ; Gunabalasingam, M. ; Patrick, B. O. ; Kennepohl, P. Probing Covalency In Halogen Bonds Through Donor K-Edge X-Ray Absorption Spectroscopy: Polyhalides As Coordination Complexes. Faraday Discussions In Press.

2018

Zhao, X. ; Shen, Y. ; Tong, W. ; Wang, G. ; Chen, D. Da Yong Deducing Disulfide Patterns Of Cysteine-Rich Proteins Using Signature Fragments Produced By Top-Down Mass Spectrometry. Analyst 2018, 143, 817-823.
Hettle, A. G. ; Vickers, C. ; Robb, C. S. ; Liu, F. ; Withers, S. G. ; Hehemann, J. - H. ; Boraston, A. B. The Molecular Basis Of Polysaccharide Sulfatase Activity And A Nomenclature For Catalytic Subsites In This Class Of Enzyme. Structure 2018.
Smirnova, I. ; Kasho, V. ; Jiang, X. ; Chen, H. - M. ; Withers, S. G. ; H Kaback, R. Oversized Galactosides As A Probe For Conformational Dynamics In Lacy. Proceedings of the National Academy of Sciences 2018, 115, 4146–4151.
Bizzotto, D. ; Burgess, I. J. ; Doneux, T. ; Sagara, T. ; Yu, H. Zhong Beyond Simple Cartoons: Challenges In Characterizing Electrochemical Biosensor Interfaces. ACS Sensors 2018, acssensors.7b00840.
Leung, K. K. ; Gaxiola, A. Diaz; Yu, H. Zhong; Bizzotto, D. Tailoring The Dna Sam Surface Density On Different Surface Crystallographic Features Using Potential Assisted Thiol Exchange. Electrochimica Acta 2018, 261, 188–197.
Chile, L. - E. ; Kaser, S. J. ; Hatzikiriakos, S. G. ; Mehrkhodavandi, P. Synthesis And Thermorheological Analysis Of Biobased Lignin-Graft-Poly(Lactide) Copolymers And Their Blends. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2018, 6, 1650-1661.
Wang, J. ; Zhou, Y. ; Wang, M. ; Bi, W. ; Li, H. ; Chen, D. Da Yong High-Throughput Analysis For Artemisinins With Deep Eutectic Solvents Mechanochemical Extraction And Direct Analysis In Real Time Mass Spectrometry. Analytical Chemistry 2018, null.
Hedges, J. B. ; Kuatsjah, E. ; Du, Y. - L. ; Eltis, L. D. ; Ryan, K. S. Snapshots Of The Catalytic Cycle Of An O2, Pyridoxal Phosphate-Dependent Hydroxylase. ACS Chemical Biology 2018, In Press.
Dehn, M. H. ; Arseneau, D. J. ; Buck, T. ; Cortie, D. L. ; Fleming, D. G. ; King, S. R. ; MacFarlane, W. A. ; McDonagh, A. M. ; McFadden, R. M. L. ; Mitchell, D. R. G. ; , Nature Of Magnetism In Thiol-Capped Gold Nanoparticles Investigated With Muon Spin Rotation. Applied Physics Letters 2018, 112, 053105.
Ma, H. ; Zhang, K. ; Jiang, Q. ; Dai, D. ; Li, H. ; Bi, W. ; Chen, D. Da Yong Characterization Of Plant Polysaccharides From Dendrobium Officinale By Multiple Chromatographic And Mass Spectrometric Techniques. Journal of Chromatography A 2018, 1547, 29 - 36.
MacLennan, M. S. ; Peru, K. M. ; Swyngedouw, C. ; Fleming, I. ; Chen, D. D. Y. ; Headley, J. V. Characterization Of Athabasca Lean Oil Sands And Mixed Surficial Materials: Comparison Of Capillary Electrophoresis-Low Resolution Mass Spectrometry And High-Resolution Mass Spectrometry. Rapid Communications in Mass Spectrometry 2018.
Warth, B. ; Raffeiner, P. ; Granados, A. ; Huan, T. ; Fang, M. ; Forsberg, E. M. ; H Benton, P. ; Goetz, L. ; Johnson, C. H. ; Siuzdak, G. Metabolomics Reveals That Dietary Xenoestrogens Alter Cellular Metabolism Induced By Palbociclib/letrozole Combination Cancer Therapy. Cell chemical biology 2018.
Zhang, K. ; Ma, H. ; Yan, P. ; Tong, W. ; Huang, X. ; Chen, D. D. Y. Electrochemical Detection Of Microcystin-Lr Based On Its Deleterious Effect On Dna. Talanta 2018, 185, 405-410.
Guijas, C. ; J Montenegro-Burke, R. ; Domingo-Almenara, X. ; Palermo, A. ; Warth, B. ; Hermann, G. ; Koellensperger, G. ; Huan, T. ; Uritboonthai, W. ; Aisporna, A. E. ; , Metlin: A Technology Platform For Identifying Knowns And Unknowns. Analytical chemistry 2018.
Liu, P. F. ; Li, Y. J. ; Wang, Y. ; Bateman, A. P. ; Zhang, Y. ; Gong, Z. H. ; Bertram, A. K. ; Martin, S. T. Viscous States Affect The Browning Of Atmospheric Organic Particulate Matter. ACS CENTRAL SCIENCE 2018, 4, 207-215.
Kovalchik, K. A. ; Moggridge, S. ; Chen, D. D. Y. ; Morin, G. B. ; Hughes, C. S. Parsing And Quantification Of Raw Orbitrap Mass Spectrometer Data Using Rawquant. Journal of Proteome Research 2018, null.
Ma, H. ; Jiang, Q. ; Dai, D. ; Li, H. ; Bi, W. ; Chen, D. Da Yong Direct Analysis In Real Time Mass Spectrometry For Characterization Of Large Saccharides. Analytical Chemistry 2018, null.
Wong-DeRieux, W. - S. ; Li, Y. ; Lin, P. ; Laskin, J. ; Laskin, A. ; Bertram, A. K. ; Nizkorodov, S. A. ; Shiraiwa, M. Predicting The Glass Transition Temperature And Viscosity Of Secondary Organic Material Using Molecular Composition. ATMOSPHERIC CHEMISTRY AND PHYSICS 2018, 18, 6331-6351.
Koga, Y. The Second And Higher Order Derivative Thermodynamic Quantities And Fluctuation Functions. Journal of Molecular Liquids 2018, 249, 1009–1011.
Zaveri, R. A. ; Shilling, J. E. ; Zelenyuk, A. ; Liu, J. ; Bell, D. M. ; D'Ambro, E. L. ; Gaston, C. J. ; J.A., T. ; Laskin, A. ; Ling, P. ; Wilson, J. ; Easter, R. C. ; Wang, J. ; Bertram, A. K. ; Martin, S. T. ; Seinfeld, J. H. ; Worsnop, D. R. Growth Kinetics And Size Distribution Dynamics Of Viscous Secondary Organic Aerosol. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018, 52, 1191-1199.
Yonenaga, K. ; Morita, T. ; Nishikawa, K. ; Koga, Y. Effects Of Ionic Liquid Constituent Cations, Tetraalkylammoniums, On Water Studied By Means Of The “1-Propanol Probing Methodology”. Journal of Molecular Liquids 2018, 252, 58-61.
Reid, J. P. ; Bertram, A. K. ; Topping, D. O. ; Laskin, A. ; Martin, S. T. ; Petters, M. D. ; Pope, F. D. ; Rovelli, G. The Viscosity Of Atmospherically Relevant Organic Particles. NATURE COMMUNICATIONS 2018, 9.
MacLennan, M. S. ; Kok, M. G. M. ; Soliman, L. ; So, A. ; Hurtado-Coll, A. ; Chen, D. D. Y. Capillary Electrophoresis-Mass Spectrometry For Targeted And Untargeted Analysis Of The Sub-5 Kda Urine Metabolome Of Patients With Prostate Or Bladder Cancer: A Feasibility Study. Journal of Chromatography B 2018, 1074–1075, 79 - 85.
Forsberg, E. M. ; Huan, T. ; Rinehart, D. ; H Benton, P. ; Warth, B. ; Hilmers, B. ; Siuzdak, G. ; Wolan, D. W. ; Spiker, M. E. ; Benton, H. P. ; Siuzdak, G. Data Processing, Multi-Omic Pathway Mapping, And Metabolite Activity Analysis Using Xcms Online. Nature protocols 2018, 13, 633-651.
Macdonald, S. S. ; Patel, A. ; Larmour, V. L. C. ; Morgan-Lang, C. ; Hallam, S. J. ; Mark, B. L. ; Withers, S. G. Structural And Mechanistic Analysis Of A Beta-Glycoside Phosphorylase Identified By Screening A Metagenomic Library. Journal of Biological Chemistry 2018, 293, 3451-3467.
Dehn, M. H. ; Fleming, D. G. ; W MacFarlane, A. ; MacLachlan, M. J. ; Zamarion, V. M. ; Kiefl, R. F. Dynamics Of Anisotropic Muonium On Silica Surfaces Explained By Monte Carlo Simulation Of The Muon Depolarization. In Proceedings of the 14th International Conference on Muon Spin Rotation, Relaxation and Resonance ($μ$SR2017); Proceedings of the 14th International Conference on Muon Spin Rotation, Relaxation and Resonance ($μ$SR2017); 2018.
Saxena, H. ; Hsu, B. ; de Asis, M. ; Zierke, M. ; Sim, L. ; Withers, S. G. ; Wakarchuk, W. Characterization Of A Thermostable Endoglucanase From Cellulomonas Fimi Atcc484. Biochemistry and Cell Biology 2018, 96, 68–76.
Kreitzman, S. R. ; Cottrell, S. P. ; Fleming, D. G. ; Sun-Mack, S. Understanding The Double Quantum Muonium Rf Resonance. In Proceedings of the 14th International Conference on Muon Spin Rotation, Relaxation and Resonance ($μ$SR2017); Proceedings of the 14th International Conference on Muon Spin Rotation, Relaxation and Resonance ($μ$SR2017); 2018.
Weber, P. ; Nasseri, S. A. ; Pabst, B. M. ; Torvisco, A. ; Müller, P. ; Paschke, E. ; Tschernutter, M. ; Windischhofer, W. ; Withers, S. G. ; Wrodnigg, T. M. ; , Potent Gh20 N-Acetyl-$\beta$-D-Hexosaminidase Inhibitors: N-Substituted 3-Acetamido-4-Amino-5-Hydroxymethyl-Cyclopentanediols. Molecules 2018, 23, 708.

2017

Lizak, C. ; Worrall, L. J. ; Baumann, L. ; Pfleiderer, M. M. ; Volkers, G. ; Sun, T. ; Sim, L. ; Wakarchuk, W. ; Withers, S. G. ; Strynadka, N. C. J. X-Ray Crystallographic Structure Of A Bacterial Polysialyltransferase Provides Insight Into The Biosynthesis Of Capsular Polysialic Acid. Scientific Reports 2017, 7, 5842.
Kovalchik, K. A. ; MacLennan, M. S. ; Peru, K. M. ; Ajaero, C. ; McMartin, D. W. ; Headley, J. V. ; Chen, D. D. Y. Characterization Of Dicarboxylic Naphthenic Acid Fraction Compounds Utilizing Amide Derivatization: Proof Of Concept. Rapid Communications in Mass Spectrometry 2017, 31, 2057-2065.
He, J. ; Dettelbach, K. E. ; Salvatore, D. A. ; Li, T. ; Berlinguette, C. P. High-Throughput Synthesis Of Mixed-Metal Electrocatalysts For Co2 Reduction. Angewandte Chemie 2017, 129, 6164–6168.
Comba, P. ; Jermilova, U. ; Orvig, C. ; Patrick, B. O. ; Ramogida, C. F. ; Rueck, K. ; Schneider, C. ; Starke, M. Octadentate Picolinic Acid-Based Bispidine Ligand For Radiometal Ions. Chem. Eur. J. 2017, 23, 15945-15956.
Rastak, N. ; Pajunoja, A. ; Navarro, J. C. Acosta; Ma, J. ; Song, M. ; Partridge, D. G. ; Kirkevag, A. ; Leong, Y. ; Hu, W. W. ; Taylor, N. F. ; Lambe, A. ; Cerully, K. ; Bougiatioti, A. ; Liu, P. ; Krejci, R. ; Petaja, T. ; Percival, C. ; Davidovits, P. ; Worsnop, D. R. ; Ekman, A. M. L. ; Nenes, A. ; Martin, S. ; Jimenez, J. L. ; Collins, D. R. ; Topping, D. O. ; Bertram, A. K. ; Zuend, A. ; Virtanen, A. ; Riipinen, I. Microphysical Explanation Of The Rh-Dependent Water Affinity Of Biogenic Organic Aerosol And Its Importance For Climate. GEOPHYSICAL RESEARCH LETTERS 2017, 44, 5167-5177.
Osten, K. M. ; Mehrkhodavandi, P. Indium Catalysts For Ring Opening Polymerization: Exploring The Importance Of Catalyst Aggregation. ACCOUNTS OF CHEMICAL RESEARCH 2017, 50, 2861-2869.
Brion, C. E. ; Wolfe, S. ; Shi, Z. ; Cooper, G. ; Zheng, Y. Jeff An Investigation Of Hybridization And The Orbital Models Of Molecular Electronic Structure For Ch4, Nh3, And H2O. Canadian Journal of Chemistry 2017, 95, 1314–1322.
da Silva, J. P. ; Fagundes, F. D. ; Back, D. F. ; Ellena, J. ; James, B. R. ; de Araujo, M. P. Studies On The Ru (Ii) Monocationic Complexes [Rucl 2 (No)(P–N)(Pr 3)] Pf 6, Where P–N= O-Diphenylphosphino-N, N-Dimethylaniline, And R= Ph And P-Xc 6 H 4 (X= Ome, Me, F). Inorganica Chimica Acta 2017, 454, 40–45.
Chile, L. - E. ; Ebrahimi, T. ; Wong, A. ; Aluthge, D. C. ; Hatzikiriakos, S. G. ; Mehrkhodavandi, P. Impact Of Aryloxy Initiators On The Living And Immortal Polymerization Of Lactide. DALTON TRANSACTIONS 2017, 46, 6723-6733.
Brandt, J. W. ; Chong, E. ; Schafer, L. L. Ligand Effects And Kinetic Investigations Of Sterically Accessible 2-Pyridonate Tantalum Complexes For Hydroaminoalkylation. ACS Catalysis 2017, 7 (9), 6323–6330.
Yu, Z. Landis; Yang, C. Wei Tony; Triffaux, E. ; Doneux, T. ; Turner, R. F. B. ; Bizzotto, D. Measuring And Remediating Nonspecific Modifications Of Gold Surfaces Using A Coupled In Situ Electrochemical Fluorescence Microscopic Methodology. Analytical Chemistry 2017, 89, 886–894.
Cao, Y. ; Wang, X. ; Shi, X. ; Clee, S. M. ; McGeer, P. L. ; Wolf, M. O. ; Orvig, C. Biological Imaging With Medium-Sensitive Bichromatic Flexible Fluorescent Dyes. Angew. Chem. Int. Ed. 2017, 56, 15603–15606.
Chile, L. - E. ; Mehrkhodavandi, P. ; Hatzikiriakos, S. G. Aromatic Interactions In Aryl-Capped Polylactides: A Thermorheological Investigation. JOURNAL OF RHEOLOGY 2017, 61, 1137-1148.
Pitchford, L. C. ; Alves, L. L. ; Bartschat, K. ; Biagi, S. F. ; Bordage, M. - C. ; Bray, I. ; Brion, C. E. ; Brunger, M. J. ; Campbell, L. ; Chachereau, A. ; Chaudhury, B. ; Christophorou, L. G. ; Carbone, E. ; Dyatko, N. A. ; Franck, C. M. ; Fursa, D. V. ; Gangwar, R. K. ; Guerra, V. ; Haefliger, P. ; Hagelaar, G. J. M. ; Hoesl, A. ; Itikawa, Y. ; Kochetov, I. V. ; McEachran, R. P. ; W. Morgan, L. ; Napartovich, A. P. ; Puech, V. ; Rabie, M. ; Sharma, L. ; Srivastava, R. ; Stauffer, A. D. ; Tennyson, J. ; de Urquijo, J. ; van Dijk, J. ; Viehland, L. A. ; Zammit, M. C. ; Zatsarinny, O. ; Pancheshnyi, S. Lxcat: An Open-Access, Web-Based Platform For Data Needed For Modeling Low Temperature Plasmas. Plasma Processes and Polymers 2017, 14, 1600098–n/a.
Kennedy, D. C. ; James, B. R. Synthesis And Antiproliferatory Activity Of Ruthenium Complexes Containing N-Heterocyclic Carboxylates. Inorganic Chemistry Communications 2017, 78, 32–36.
Ebrahimi, T. ; Taghipour, H. ; Griessl, D. ; Mehrkhodavandi, P. ; Hatzikiriakos, S. G. ; van Ruymbeke, E. Binary Blends Of Entangled Star And Linear Poly(Hydroxybutyrate): Effect Of Constraint Release And Dynamic Tube Dilation. MACROMOLECULES 2017, 50, 2535-2546.